DNA Binding Motif
| Accessions: | EOMES_DBD_1 (HumanTF 1.0), MA0800.1 (JASPAR 2024) |
| Names: | EOMES |
| Organisms: | Homo sapiens |
| Libraries: | HumanTF 1.0 1, JASPAR 2024 2 1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | Site type: monomeric; SELEX cycle: 3, HT-SELEX |
| Length: | 13 |
| Consensus: | aAGGTGTGAaawh |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 4526 911 2274 2122 a 02 9832 158 1259 653 A 03 1775 1004 9832 1305 G 04 23 92 9832 94 G 05 19 600 50 9832 T 06 9 8 9832 3 G 07 495 1540 98 9832 T 08 210 550 9832 980 G 09 9832 28 99 24 A 10 9832 1956 1022 3351 a 11 9832 4337 2941 3781 a 12 5649 1960 1966 4183 w 13 2501 2577 1954 2800 h |
| Type: | Heterodimer |
| Binding TFs: | EOMES_DBD (T-box) O95936 (T-box) O95936 |
| Binding Sites: | MA0800.1.10 MA0800.1.9 MA0800.1.11 MA0800.1.12 MA0800.1.13 MA0800.1.14 MA0800.1.15 MA0800.1.2 MA0800.1.3 MA0800.1.4 MA0800.1.5 MA0800.1.8 MA0800.1.1 MA0800.1.16 MA0800.1.17 MA0800.1.18 MA0800.1.19 MA0800.1.20 MA0800.1.6 MA0800.1.7 |
| Publications: | Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed] Wilson V, Conlon FL. The T-box family. Genome Biol : (2002;3(6):REVIEWS3008.). [Pubmed] |
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