DNA Binding Motif

						

			
Accessions: 6cro_A (3D-footprint 20231221)

			
Names: LAMBDA CRO REPRESSOR
Organisms: Enterobacteria phage lambda, Escherichia phage lambda
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: CRYSTAL STRUCTURE OF LAMBDA-CRO BOUND TO A CONSENSUS OPERATOR AT 3.0 ANGSTROM RESOLUTION
Length: 17
Consensus: TATCACCnnnGGTGATA
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0      0     96      T
02     96      0      0      0      A
03      9      7      7     73      T
04      0     96      0      0      C
05     73      7      9      7      A
06      0     96      0      0      C
07      0     96      0      0      C
08     24     24     24     24      n
09     24     24     24     24      n
10     24     24     24     24      n
11      0      0     96      0      G
12      0      0     96      0      G
13      7      7      7     75      T
14      0      0     96      0      G
15     73      9      7      7      A
16      0      0      0     96      T
17     96      0      0      0      A
Binding TFs: 6cro_A (Cro)
Binding Sites: 6cro_R
6cro_U
			
Publications: Albright R.A, Matthews B.W. Crystal structure of lambda-Cro bound to a consensus operator at 3.0 A resolution. Journal of molecular biology 280:137-51 (1998). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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