DNA Binding Motif

						

			
Accessions: MA0864.3 (JASPAR 2024)

			
Names: E2F2
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 13
Consensus: wtttGGCGCCaww
Weblogo: 
PSSM: P0      A      C      G      T
01   1926    316    811   2567      w
02   1329    528   1082   3641      t
03   1251    314    876   3872      t
04   1129    163    927   4386      t
05    282   1370   4565     33      G
06      2     32   4653      1      G
07     20   4669      0      0      C
08     17      0   4673      4      G
09      3   4645     26      1      C
10    348   4434   1102    229      C
11   4319   1192    271   1123      a
12   1764    579    118   2759      w
13   1645    516    528   2678      w
Type: Heterodimer
Binding TFs: Q14209 (E2F/DP family winged-helix DNA-binding domain)
Q14209
			
Publications: Rabinovich A, Jin VX, Rabinovich R, Xu X, Farnham PJ. E2F in vivo binding specificity: comparison of consensus versus nonconsensus binding sites. Genome Res 18:1763-77 (2008). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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