DNA Binding Motif

Accessions: MA0765.2 (JASPAR 2024)
Names: ETV5
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 11
Consensus: bcACTTCCGsy
Weblogo:
PSSM: P0 A C G T
01 4531 8003 7117 6667 b
02 4782 10307 6129 5100 c
03 19410 2443 3017 1448 A
04 312 24041 994 971 C
05 1043 1145 408 23722 T
06 222 956 816 24324 T
07 243 25484 336 255 C
08 367 25061 498 392 C
09 1295 1743 18757 4523 G
10 3017 6921 11944 4436 s
11 4679 8378 6039 7222 y
Type: Heterodimer
Binding TFs: P41161 (Ets-domain, PEA3 subfamily ETS-domain transcription factor N terminal domain)
P41161
Binding Sites: MA0765.2.1
MA0765.2.10
MA0765.2.11
MA0765.2.12
MA0765.2.13
MA0765.2.14
MA0765.2.15
MA0765.2.16
MA0765.2.17
MA0765.2.18
MA0765.2.19
MA0765.2.2
MA0765.2.20 / MA0765.2.9
MA0765.2.3
MA0765.2.4
MA0765.2.5
MA0765.2.6
MA0765.2.7
MA0765.2.8
Publications: Cooper C.D, Newman J.A, Aitkenhead H, Allerston C.K, Gileadi O. Structures of the Ets Domains of Transcription Factors ETV1, ETV4, ETV5 and FEV: Determinants of DNA Binding and Redox Regulation by Disulfide bond formation. The Journal of biological chemistry : (2015). [Pubmed]

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