DNA Binding Motif

						

			
Accessions: Arx_DBD (HumanTF 1.0)

			
Names: Arx
Organisms: Mus musculus
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 2
Length: 13
Consensus: hTAATywaATTAa
Weblogo: 
PSSM: P0      A      C      G      T
01   2459   2513   1702   2485      h
02   1723    517    228   9160      T
03   9160     88    544    624      A
04   9160     24     64     29      A
05    523   1022    255   9160      T
06    328   2919    798   6241      y
07   3426   1613   1819   2302      w
08   6721    600   2438    205      a
09   9160    189    732    186      A
10     32     86     28   9160      T
11   1334    786    152   9160      T
12   9160    144    333    752      A
13   3699   1663   2263   1535      a
Binding TFs: Arx_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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