DNA Binding Motif

Accessions: MA1428.1 (JASPAR 2024)
Names: TCP8
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 9
Consensus: gGGscCCAC
Weblogo:
PSSM: P0 A C G T
01 172 240 373 213 g
02 41 15 801 140 G
03 143 29 725 101 G
04 150 255 433 161 s
05 160 652 63 122 c
06 32 963 2 0 C
07 20 902 0 76 C
08 864 1 113 20 A
09 32 725 97 145 C
Type: Heterodimer
Binding TFs: Q9C518 (TCP family transcription factor)
Q9C518
Publications: Wang X, Gao J, Zhu Z, Dong X, Wang X, Ren G, Zhou X, Kuai B. TCP transcription factors are critical for the coordinated regulation of isochorismate synthase 1 expression in Arabidopsis thaliana. Plant J 82:151-62 (2015). [Pubmed]

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