DNA Binding Motif

Accessions: M0188 (AthalianaCistrome v4_May2016)
Names: bZIP53.ampDAP, T11942;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: dwwGmTGACGTGKCa
Weblogo:
PSSM: P0 A C G T
01 160 60 154 164 d
02 205 70 96 167 w
03 148 42 57 291 w
04 33 6 430 69 G
05 174 319 43 2 m
06 3 15 0 520 T
07 0 0 481 57 G
08 538 0 0 0 A
09 0 534 0 4 C
10 1 0 537 0 G
11 0 0 0 538 T
12 0 0 538 0 G
13 0 0 394 144 K
14 116 404 3 15 C
15 319 77 75 67 a
Binding TFs: T11942 (bZIP transcription factor, Basic region leucine zipper)
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

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