DNA Binding Motif

						

			
Accessions: UN0137.1 (JASPAR 2024)

			
Names: SOX7
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 13
Consensus: ACAATrwyATTGT
Weblogo: 
PSSM: P0      A      C      G      T
01  16897   1126   1328   2032      A
02      0  16897      0    141      C
03  16897    514     11    538      A
04  16897   1625    414    178      A
05     61      0     22  16897      T
06   4261   1365   7668   3603      r
07   4470   3900   4099   4428      w
08   3512   7583   1350   4452      y
09  16897      9     14     82      A
10    181    482   1654  16897      T
11    524      4    506  16897      T
12    132     23  16897     21      G
13   1957   1308   1340  16897      T
Binding TFs: Q9BT81 (HMG (high mobility group) box, Domain of unknown function (DUF1898), Sox C-terminal transactivation domain)
			
	
			


			

				

				
				
				
				

			

			

		

	
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