DNA Binding Motif

						

			
Accessions: 2vy1_A (3D-footprint 20231221)

			
Names: PROTEIN LEAFY
Organisms: Arabidopsis thaliana
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Structure of LEAFY transcription factor from Arabidopsis thaliana in complex with DNA from AP1 promoter
Length: 9
Consensus: TGGTnnnTA
Weblogo: 
PSSM: P0      A      C      G      T
01      9     11      9     67      T
02      0      0     96      0      G
03      0      0     96      0      G
04      0      0      0     96      T
05     24     24     24     24      n
06     24     24     24     24      n
07     24     24     24     24      n
08     11      9      9     67      T
09     67     11      9      9      A
Binding TFs: 2vy1_A (Floricaula / Leafy protein)
Binding Sites: 2vy1_W
			
Publications: Hamès C, Ptchelkine D, Grimm C, Thevenon E, Moyroud E, Gérard F, Martiel J.L, Benlloch R, Parcy F, Müller C.W. Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins. The EMBO journal 27:2628-37 (2008). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.