DNA Binding Motif

						

			
Accessions: M0131 (AthalianaCistrome v4_May2016)

			
Names: CRF4.DAP, T20031;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 21
Consensus: cckCCGCCGCCrCcdcckCcg
Weblogo: 
PSSM: P0      A      C      G      T
01     16    123     34     53      c
02     48    144      0     34      c
03     44     13     77     92      k
04     11    185     22      8      C
05     12    207      0      7      C
06     26      2    174     24      G
07      0    226      0      0      C
08      0    226      0      0      C
09     12      0    208      6      G
10      0    190      0     36      C
11     16    207      0      3      C
12     87     10    105     24      r
13     13    159      9     45      C
14     31    125     26     44      c
15     66     10     88     62      d
16     35    127     17     47      c
17     56    107     24     39      c
18     48     18     95     65      k
19     13    162     25     26      C
20     14    144     22     46      c
21     50     34     91     51      g
Binding TFs: T20031 (AP2 domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.