DNA Binding Motif

						

			
Accessions: MA0524.1 (JASPAR 2024)

			
Names: TFAP2C
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 15
Consensus: hmydsCCyCAGGsca
Weblogo: 
PSSM: P0      A      C      G      T
01   4801   6752   2123   4750      h
02   6477   4693   3347   3909      m
03   2550   4943   2643   8290      y
04   4918   2009   6098   5401      d
05    421   6040  11033    932      s
06      0  18426      0      0      C
07      0  14817      0   3609      C
08      0   9317   1237   7872      y
09   1082  14790   1768    786      C
10  16442      0   1195    789      A
11    191      0  18235      0      G
12      0      0  18426      0      G
13    285   7908  10222     11      s
14   4343   9235   1788   3060      c
15   8905   3259   2536   3726      a
Type: Heterodimer
Binding TFs: Q92754 (Transcription factor AP-2)
Q92754
Binding Sites: MA0524.1.2
MA0524.1.18
MA0524.1.15
MA0524.1.17
MA0524.1.1
MA0524.1.10
MA0524.1.11 / MA0524.1.13 / MA0524.1.19
MA0524.1.12
MA0524.1.14
MA0524.1.16
MA0524.1.20
MA0524.1.3
MA0524.1.4
MA0524.1.5
MA0524.1.6
MA0524.1.7
MA0524.1.8
MA0524.1.9
			
Publications: Woodfield G.W, Chen Y, Bair T.B, Domann F.E, Weigel R.J. Identification of primary gene targets of TFAP2C in hormone responsive breast carcinoma cells. Genes, chromosomes & cancer 49:948-62 (2010). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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