DNA Binding Motif

						

			
Accessions: NR1D1_MOUSE.H10MO.D|M01252 (HOCOMOCO 10)

			
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Length: 19
Consensus: rrrrsmmaRGGtCAsdggg
Weblogo: 
PSSM: P0      A      C      G      T
01    223     97    145     35      r
02    196     28    212     64      r
03    127     57    284     32      r
04    179     32    167    122      r
05    114    171    153     62      s
06    208    155     90     47      m
07    174    149    120     57      m
08    186     94     99    121      a
09    343      0    154      3      R
10      6      0    477     17      G
11     11      2    407     80      G
12     28     87    116    269      t
13      0    479     13      8      C
14    491      2      0      7      A
15     95    129    251     25      s
16    176     44    134    146      d
17     99     31    284     86      g
18     82     50    247    121      g
19    104    101    208     87      g
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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