DNA Binding Motif

						

			
Accessions: MA1338.2 (JASPAR 2024)

			
Names: DPBF3
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 17
Consensus: wwwtGmCACGTGkCmww
Weblogo: 
PSSM: P0      A      C      G      T
01    836    341    460    792      w
02    819    393    480    737      w
03    709    512    414    794      w
04    317    355    262   1495      t
05     74     30   2110    215      G
06    811   1580     17     21      m
07      6   2407      5     11      C
08   2419      1      5      4      A
09      1   2409     14      5      C
10      9     26   2388      6      G
11      7      9      1   2412      T
12     97    269   2041     22      G
13    307     17    671   1434      k
14    335   1703    156    235      C
15    901    790    299    439      m
16    775    462    390    802      w
17    711    520    359    839      w
Type: Heterodimer
Binding TFs: Q9LES3 (bZIP transcription factor, Basic region leucine zipper)
Q9LES3
Binding Sites: MA1338.2.1
MA1338.2.6
MA1338.2.7
MA1338.2.8
MA1338.2.10
MA1338.2.11
MA1338.2.12
MA1338.2.13
MA1338.2.15
MA1338.2.16
MA1338.2.2
MA1338.2.18
MA1338.2.3
MA1338.2.4
MA1338.2.5
MA1338.2.14
MA1338.2.17
MA1338.2.19
MA1338.2.20
MA1338.2.9
			
Publications: Choi H., Hong J., Ha J., Kang J., Kim S. Y. ABFs, a family of ABA-responsive element binding factors. J. Biol. Chem. 275:1723-1730 (2000). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.