DNA Binding Motif

						

			
Accessions: UN0562.2 (JASPAR 2024)

			
Names: HOXB2::PAX5
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 15
Consensus: GTCACGCwyCATTrv
Weblogo: 
PSSM: P0      A      C      G      T
01      2      7    886     94      G
02    205    127     14    886      T
03     13    886     10    125      C
04    886      3     17     11      A
05     13    886      0    157      C
06     75      1    886      0      G
07     11    886    295      6      C
08    295    220    128    243      w
09     30    361      2    493      y
10     49    886    185     45      C
11    886      3    200      2      A
12     73    195    105    886      T
13     17    178      2    886      T
14    886     13    467    153      r
15    307    315    258      6      v
Type: Heterodimer
Binding TFs: Q02548 ('Paired box' domain, Paired-box protein 2 C terminal)
Q02548
			
	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.