DNA Binding Motif

						

			
Accessions: UN0470.2 (JASPAR 2024)

			
Names: Srf
Organisms: Ciona intestinalis
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: SELEX
Length: 10
Consensus: ccawATATGG
Weblogo: 
PSSM: P0      A      C      G      T
01    157    581    130    133      c
02     67    643     68    222      c
03    366    196    190    248      a
04    257    146    101    497      w
05    819     26     62     93      A
06     66     53     31    850      T
07    880     12     24     84      A
08     98     51     41    810      T
09     63     14    899     24      G
10     25     31    905     39      G
Type: Heterodimer
Binding TFs: Q4H2R3 (SRF-type transcription factor (DNA-binding and dimerisation domain))
Q4H2R3
			
	
			


			

				

				
				
				
				

			

			

		

	
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