DNA Binding Motif

						

			
Accessions: NKX3-2_methyl_1 (HT-SELEX2 May2017)

			
Names: NKX3-2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: acCACTTAac
Weblogo: 
PSSM: P0      A      C      G      T
01   1584    819    803    505      a
02   1501   3711   1854    581      c
03     77   3711     24    468      C
04   3711    113      0    231      A
05     62   3711      0      3      C
06     33     12     43   3711      T
07     22    373      0   3711      T
08   3711    323    175    499      A
09   3711   1332   1902   1512      a
10    674   1431    830    776      c
Binding TFs: NKX3-2 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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