DNA Binding Motif
| Accessions: | SOX9_HUMAN.H10MO.B|M01522 (HOCOMOCO 10), SOX9_MOUSE.H10MO.B|M01350 (HOCOMOCO 10) |
| Names: | SOX9 |
| Organisms: | Homo sapiens, Mus musculus |
| Libraries: | HOCOMOCO 10 1 1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed] |
| Notes: | SOX-related factors{4.1.1}; Group E{4.1.1.5} |
| Length: | 11 |
| Consensus: | yCyATTGTTyt |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 21 60 24 55 y 02 4 115 17 24 C 03 6 102 2 50 y 04 144 0 0 16 A 05 2 1 2 155 T 06 1 3 1 155 T 07 1 0 159 0 G 08 5 1 0 154 T 09 11 5 9 135 T 10 15 88 7 50 y 11 27 19 19 95 t |
| Type: | Heterodimer |
| Binding TFs: | SOX9_HUMAN (HMG (high mobility group) box, Domain of unknown function (DUF1898), Sox developmental protein N terminal ) SOX9_MOUSE (HMG (high mobility group) box, Domain of unknown function (DUF1898), Sox developmental protein N terminal ) |
| Publications: | Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed] |
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