DNA Binding Motif
| Accessions: | GCM1_FIGLA_2_3_4_5 (HumanTF2 1.0) |
| Names: | GCM1_FIGLA |
| Organisms: | Homo sapiens |
| Libraries: | HumanTF2 1.0 1 1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed] |
| Notes: | Site type: heterodimeric; Experiment type: CAP-SELEX |
| Length: | 19 |
| Consensus: | CAssTGkkgggsrTGcGGG |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 92 1391 79 95 C 02 1391 63 147 62 A 03 4 482 909 77 s 04 20 472 918 41 s 05 50 51 108 1391 T 06 44 32 1391 24 G 07 121 237 646 386 k 08 300 210 413 469 k 09 335 283 498 275 g 10 326 266 473 326 g 11 300 267 481 343 g 12 226 354 562 248 s 13 635 256 446 54 r 14 154 231 179 1391 T 15 430 108 1391 24 G 16 425 1391 423 455 c 17 161 47 1391 397 G 18 44 39 1391 86 G 19 35 20 1391 24 G |
| Type: | Heterodimer |
| Binding TFs: | FIGLA_TF2 (Helix-loop-helix DNA-binding domain) GCM1_TF1 (GCM motif protein) |
| Publications: | Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed] |
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