DNA Binding Motif

						

			
Accessions: NHLH1_DBD (HumanTF 1.0)

			
Names: NHLH1
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 4
Length: 10
Consensus: CGCAGCTGCs
Weblogo: 
PSSM: P0      A      C      G      T
01     30    189     14     11      C
02     34     36    189     12      G
03      4    189      0      0      C
04    189      1      3      0      A
05      0     38    189     19      G
06      5    189      1      1      C
07      4      0      0    189      T
08      2      0    189      0      G
09      0    189      0      0      C
10     32     98    189     67      s
Binding TFs: NHLH1_DBD (Helix-loop-helix DNA-binding domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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