DNA Binding Motif

						

			
Accessions: ZBTB37_2 (HT-SELEX2 May2017), UN0145.1 (JASPAR 2024)

			
Names: ZBTB37
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1, JASPAR 2024 2
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 17
Consensus: atGCCGwvTTrGCCGAy
Weblogo: 
PSSM: P0      A      C      G      T
01   2829   1621   1771   2004      a
02    990    699   1544   6726      t
03    348    228   8139    442      G
04      6   8212    116      0      C
05    523   7756      0     18      C
06    291     34   8198     15      G
07   2302   1542    350   4033      w
08   3265   2452   2496     14      v
09    209    203   1162   7911      T
10    276    275    318   8032      T
11   4988      8   3227     53      r
12    173     56   8228      3      G
13     36   8184     66     20      C
14    153   8161     32     39      C
15    231     17   8211     20      G
16   6400    145    627   1391      A
17   1301   2914    727   3284      y
Type: Heterodimer
Binding TFs: ZBTB37 (Zinc finger, C2H2 type, C2H2 type zinc-finger (2 copies), Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Q5TC79 (Zinc finger, C2H2 type, BTB/POZ domain, Zinc-finger double domain, C2H2-type zinc finger)
Q5TC79
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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