DNA Binding Motif
| Accessions: | 2hzv_A (3D-footprint 20231221) |
| Names: | Nickel-responsive regulator |
| Organisms: | Escherichia coli, strain K12 |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | NikR-operator DNA complex |
| Length: | 5 |
| Consensus: | TCAta |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0 0 0 96 T 02 12 84 0 0 C 03 96 0 0 0 A 04 12 12 12 60 t 05 60 12 12 12 a |
| Binding TFs: | 2hzv_A (Ribbon-helix-helix protein, copG family, NikR C terminal nickel binding domain) |
| Binding Sites: | 2hzv_I 2hzv_J |
| Publications: | Schreiter E.R, Wang S.C, Zamble D.B, Drennan C.L. NikR-operator complex structure and the mechanism of repressor activation by metal ions. Proceedings of the National Academy of Sciences of the United States of America 103:13676-81 (2006). [Pubmed] |
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