DNA Binding Motif

						

			
Accessions: M0471 (AthalianaCistrome v4_May2016)

			
Names: LBD13.ampDAP, T09309;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: CGsCGgadwwtrCGG
Weblogo: 
PSSM: P0      A      C      G      T
01     34    494      4     66      C
02     34      6    507     51      G
03      4    210    384      0      s
04     17    581      0      0      C
05     23      0    560     15      G
06    116    110    280     92      g
07    298     94    106    100      a
08    245     14    170    169      d
09    225     35    115    223      w
10    188     88     18    304      w
11    109     86    141    262      t
12    150    113    256     79      r
13     45    498      1     54      C
14      0      0    598      0      G
15      1     40    555      2      G
Binding TFs: T09309 (Protein of unknown function DUF260)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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