DNA Binding Motif

						

			
Accessions: ALX3_methyl_2 (HT-SELEX2 May2017)

			
Names: ALX3
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 8
Consensus: ckcrTTAr
Weblogo: 
PSSM: P0      A      C      G      T
01    549    869    588    540      c
02   1386     50   1768   2546      k
03    591   2546    568    502      c
04   2321      0   2546      0      r
05    289    150     76   2546      T
06    386     35    104   2546      T
07   2546      0     52      0      A
08    775    538    680    552      r
Binding TFs: ALX3 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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