DNA Binding Motif
| Accessions: | MA2450.1 (JASPAR 2024) |
| Names: | SPL7A |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 11 |
| Consensus: | GTASTACCGCt |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 4793 13029 51418 4939 G 02 7087 7097 3079 56916 T 03 70586 1282 926 1385 A 04 414 52515 20914 336 S 05 2702 3751 996 66730 T 06 67306 951 3020 2902 A 07 477 72357 467 878 C 08 864 66481 1147 5687 C 09 4612 2593 65334 1640 G 10 644 69753 1192 2590 C 11 7596 10310 9017 47256 t |
| Binding Sites: | MA2450.1.1 MA2450.1.10 MA2450.1.11 MA2450.1.12 MA2450.1.13 MA2450.1.14 MA2450.1.15 MA2450.1.16 / MA2450.1.5 MA2450.1.17 MA2450.1.18 MA2450.1.19 MA2450.1.2 MA2450.1.20 MA2450.1.3 MA2450.1.4 MA2450.1.6 MA2450.1.7 MA2450.1.8 MA2450.1.9 |
| Publications: | Yamasaki K, Kigawa T, Inoue M, Yamasaki T, Yabuki T, Aoki M, Seki E, Matsuda T, Tomo Y, Terada T, Shirouzu M, Tanaka A, Seki M, Shinozaki K, Yokoyama S. An Arabidopsis SBP-domain fragment with a disrupted C-terminal zinc-binding site retains its tertiary structure. FEBS Lett 580:2109-16 (2006). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.