DNA Binding Motif

						

			
Accessions: PurR (RegulonDB 7.5)

			
Names: PurR
Organisms: ECK12
Libraries: RegulonDB 7.5 1
1 Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed]
Length: 16
Consensus: rcGCAAaCGtTTtCyT
Weblogo: 
PSSM: P0      A      C      G      T
01     14      0      6      1      r
02      2     14      2      3      c
03      0      1     20      0      G
04      1     18      2      0      C
05     21      0      0      0      A
06     21      0      0      0      A
07     13      2      1      5      a
08      0     21      0      0      C
09      0      0     21      0      G
10      2      0      5     14      t
11      0      0      1     20      T
12      0      1      1     19      T
13      5      0      3     13      t
14      0     20      0      1      C
15      1      8      5      7      y
16      2      2      1     16      T
Binding TFs: ECK120005267 (Bacterial regulatory proteins, lacI family, Periplasmic binding proteins and sugar binding domain of LacI family, Periplasmic binding protein-like domain, Periplasmic binding protein domain)
Binding Sites: ECK120012857
ECK120012859
ECK120012861
ECK120012863
ECK120012865
ECK120012867
ECK120012869
ECK120012871
ECK120012873
ECK120012943
ECK120013225
ECK120013227
ECK120013425
ECK120013503
ECK120013559
ECK120020639
ECK120026485
ECK120030275
ECK120030277
ECK125141282
ECK125141284
			
	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.