DNA Binding Motif

						

			
Accessions: MA0269.2 (JASPAR 2024)

			
Names: AFT1
Organisms: Saccharomyces cerevisiae
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 10
Consensus: tAkTGCACCC
Weblogo: 
PSSM: P0      A      C      G      T
01    136     78    142    641      t
02    716     25     31    226      A
03    145     31    288    535      k
04     34     47     39    878      T
05    160     10    812     16      G
06     10    966     11     10      C
07    961      9     15     14      A
08      8    972      9     10      C
09     25    955      2     16      C
10     19    740     13    225      C
Type: Heterodimer
Binding TFs: P22149 (Transcription factor AFT)
P22149
			
Publications: Newburger D.E, Bulyk M.L. UniPROBE: an online database of protein binding microarray data on protein-DNA interactions. Nucleic acids research 37:D77-82 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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