DNA Binding Motif

						

			
Accessions: LHX4_methyl_5 (HT-SELEX2 May2017)

			
Names: LHX4
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 8
Consensus: ytCrTTAw
Weblogo: 
PSSM: P0      A      C      G      T
01    812   1221    554   1025      y
02   1009    212    858   2246      t
03    548   2246     55     58      C
04   1773      0   2246      0      r
05     45    193     26   2246      T
06    393    411     99   2246      T
07   2246    119    136    114      A
08    927    313    431    574      w
Binding TFs: LHX4 (Homeobox domain, Homeobox KN domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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