DNA Binding Motif

						

			
Accessions: COT2_MOUSE.H10MO.B|M01040 (HOCOMOCO 10)

			
Names: Nr2f2
Organisms: Mus musculus
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: RXR-related receptors (NR2){2.1.3}; COUP-like receptors (NR2F){2.1.3.5}
Length: 10
Consensus: carAGGTCAr
Weblogo: 
PSSM: P0      A      C      G      T
01     12     49      7      9      c
02     47      9      9     12      a
03     46      6     22      3      r
04     59      0     16      2      A
05      0      0     77      0      G
06      1      0     64     12      G
07      1      0      1     75      T
08      1     71      2      3      C
09     70      4      3      0      A
10     37      8     22     10      r
Binding TFs: COT2_MOUSE (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains))
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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