DNA Binding Motif
| Accessions: | MA2160.1 (JASPAR 2024) |
| Names: | ceh-39 |
| Organisms: | Caenorhabditis elegans |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 11 |
| Consensus: | awwATCGATaa |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 526 101 67 109 a 02 410 69 58 266 w 03 468 14 49 272 w 04 762 8 19 14 A 05 9 20 3 771 T 06 9 776 12 6 C 07 48 7 734 14 G 08 797 3 2 1 A 09 15 11 10 767 T 10 544 51 36 172 a 11 472 57 83 191 a |
| Binding TFs: | Q22812 |
| Binding Sites: | MA2160.1.1 MA2160.1.10 MA2160.1.11 / MA2160.1.16 / MA2160.1.8 MA2160.1.12 / MA2160.1.17 / MA2160.1.20 MA2160.1.13 MA2160.1.14 MA2160.1.15 / MA2160.1.18 MA2160.1.19 MA2160.1.2 MA2160.1.3 MA2160.1.4 MA2160.1.5 MA2160.1.6 MA2160.1.7 MA2160.1.9 |
| Publications: | Farboud B, Nix P, Jow MM, Gladden JM, Meyer BJ. Molecular antagonism between X-chromosome and autosome signals determines nematode sex. Genes Dev 27:1159-78 (2013). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.