DNA Binding Motif

						

			
Accessions: SOX8_methyl_1 (HT-SELEX2 May2017)

			
Names: SOX8
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: agaACAATrs
Weblogo: 
PSSM: P0      A      C      G      T
01   1166    513    506    612      a
02    618    545   1166    658      g
03   1166    199    258    185      a
04   1166     12      6     37      A
05      0   1166      9     37      C
06   1166      0      4      7      A
07   1166      0      5     16      A
08    213      0     25   1166      T
09   1043    140   1166    227      r
10    272    332    434    128      s
Binding TFs: SOX8 (HMG (high mobility group) box, Domain of unknown function (DUF1898))
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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