DNA Binding Motif
| Accessions: | MA0510.1 (JASPAR 2024) |
| Names: | RFX5 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 15 |
| Consensus: | ytsCmTrGCAACwgs |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 343 1572 561 1392 y 02 595 796 862 1615 t 03 6 1870 1283 709 s 04 181 3687 0 0 C 05 1189 2171 61 447 m 06 0 832 0 3036 T 07 1844 1 2023 0 r 08 245 0 3514 109 G 09 0 2815 408 645 C 10 3057 497 314 0 A 11 3692 176 0 0 A 12 0 3868 0 0 C 13 2084 782 0 1002 w 14 956 361 2184 367 g 15 871 1388 1239 370 s |
| Type: | Heterodimer |
| Binding TFs: | P48382 (RFX DNA-binding domain) P48382 |
| Binding Sites: | MA0510.1.1 MA0510.1.10 MA0510.1.11 MA0510.1.12 MA0510.1.13 MA0510.1.14 MA0510.1.15 MA0510.1.16 MA0510.1.17 MA0510.1.18 MA0510.1.19 MA0510.1.2 MA0510.1.20 MA0510.1.3 MA0510.1.4 MA0510.1.5 MA0510.1.6 MA0510.1.7 MA0510.1.8 MA0510.1.9 |
| Publications: | Emery P., Strubin M., Hofmann K., Bucher P., Mach B., Reith W. A consensus motif in the RFX DNA binding domain and binding domain mutants with altered specificity. Mol. Cell. Biol. 16:4486-4494 (1996). [Pubmed] |
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