DNA Binding Motif

						

			
Accessions: ems (DrosophilaTF 1.1)

			
Names: ems
Organisms: Drosophila melanogaster
Libraries: DrosophilaTF 1.1 1
1 Down T.A, Bergman C.M, Su J, Hubbard T.J. Large-scale discovery of promoter motifs in Drosophila melanogaster. PLoS computational biology 3:e7 (2007). [Pubmed]
Length: 13
Consensus: AAnTnTAATGACA
Weblogo: 
PSSM: P0      A      C      G      T
01      1      0      0      0      A
02      1      0      0      0      A
03   0.25   0.25   0.25   0.25      n
04      0      0      0      1      T
05   0.25   0.25   0.25   0.25      n
06      0      0      0      1      T
07      1      0      0      0      A
08      1      0      0      0      A
09      0      0      0      1      T
10      0      0      1      0      G
11      1      0      0      0      A
12      0      1      0      0      C
13      1      0      0      0      A
Binding TFs: ems (Homeobox domain)
			
Publications: Taylor H. S. A regulatory element of the  spiracles homeobox gene is composed of three distinct conserved regions that bind regulatory proteins.. Mol. Reprod. Dev. 49:246-253 (1998). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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