DNA Binding Motif

						

			
Accessions: UN0454.1 (JASPAR 2024)

			
Names: Mef2
Organisms: Ciona intestinalis
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: SELEX
Length: 20
Consensus: ddkmccrATTTGGrwhhwww
Weblogo: 
PSSM: P0      A      C      G      T
01    276    185    266    272      d
02    273    147    255    325      d
03    198    110    263    429      k
04    265    405    119    211      m
05    106    655     62    178      c
06    184    430    240    146      c
07    325    221    261    193      r
08    841     23     25    112      A
09    101      8      9    882      T
10     84     23     27    866      T
11     59     72    106    763      T
12     55     36    855     54      G
13     20     18    922     40      G
14    353    165    255    227      r
15    398    199    153    250      w
16    291    276    161    272      h
17    262    278    200    260      h
18    288    222    238    253      w
19    268    236    240    256      w
20    261    242    226    271      w
Type: Heterodimer
Binding TFs: Q4H375 (SRF-type transcription factor (DNA-binding and dimerisation domain), Holliday junction regulator protein family C-terminal repeat)
Q4H375
			
	
			


			

				

				
				
				
				

			

			

		

	
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