DNA Binding Motif
| Accessions: | RXRA_DBD_1 (HumanTF 1.0) |
| Names: | RXRA |
| Organisms: | Homo sapiens |
| Libraries: | HumanTF 1.0 1 1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed] |
| Notes: | Site type: dimeric; SELEX cycle: 3 |
| Length: | 14 |
| Consensus: | grGGTCAAAGGTCA |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 38994 15029 95913 7042 g 02 68484 478 90251 117 r 03 213 154 120416 383 G 04 333 104 114145 14050 G 05 75 262 1100 99900 T 06 134 119096 2754 9897 C 07 88743 100 442 25 A 08 87714 176 2410 996 A 09 87807 106 3970 50 A 10 70 57 119892 102 G 11 117 72 113964 11036 G 12 94 193 930 98103 T 13 245 122038 2431 8621 C 14 87488 238 7573 120 A |
| Binding TFs: | RXRA_DBD (Zinc finger, C4 type (two domains)) |
| Publications: | Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed] |
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