DNA Binding Motif

						

			
Accessions: EGR2_2 (HT-SELEX2 May2017)

			
Names: EGR2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 13
Consensus: mmCrCCCACGCac
Weblogo: 
PSSM: P0      A      C      G      T
01    513    798    244    418      m
02    953   1020    133    249      m
03     11   1973     32     68      C
04    774     31   1973    300      r
05      0   1973      5      0      C
06      4   1973      0      0      C
07     30   1973      5    530      C
08   1973    317      4      0      A
09      0   1973      0      3      C
10    432     79   1973    286      G
11     18   1973     35    250      C
12   1973    889   1104    750      a
13    472    784    295    422      c
Binding TFs: EGR2 (Zinc finger, C2H2 type, Domain of unknown function (DUF3446), Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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