DNA Binding Motif

						

			
Accessions: 5bmz_B (3D-footprint 20231221)

			
Names: HcaR protein
Organisms: Acinetobacter baylyi, strain ATCC 33305 / BD413 / ADP1
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal Structure of Putative MarR Family Transcriptional Regulator HcaR from Acinetobacter sp. ADP complexed with 24mer DNA.
Length: 8
Consensus: ACTGAnAT
Weblogo: 
PSSM: P0      A      C      G      T
01     78      6      6      6      A
02      6     78      6      6      C
03      0      0      0     96      T
04      6      6     78      6      G
05     96      0      0      0      A
06     24     24     24     24      n
07     78      6      6      6      A
08      6      6      6     78      T
Binding TFs: 5bmz_B (MarR family, MarR family, Winged helix-turn-helix DNA-binding, Winged helix DNA-binding domain)
Binding Sites: 5bmz_E / 5bmz_F
			
	
			


			

				

				
				
				
				

			

			

		

	
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