DNA Binding Motif

						

			
Accessions: M0647 (AthalianaCistrome v4_May2016)

			
Names: ANAC070.DAP, T19455;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 21
Consensus: grTwrCKTrwawwwcAMGyAA
Weblogo: 
PSSM: P0      A      C      G      T
01     99     72    312    116      g
02    192     44    261    102      r
03    107      3      2    487      T
04    271      4     88    236      w
05    295     18    272     14      r
06     60    534      0      5      C
07      0      0    439    160      K
08      0      0      0    599      T
09    289     38    270      2      r
10    250    116     71    162      w
11    300     63    124    112      a
12    239     89     89    182      w
13    177    108     44    270      w
14    229     50     95    225      w
15     32    315    118    134      c
16    598      1      0      0      A
17    413    186      0      0      M
18      0      1    569     29      G
19     84    309     52    154      y
20    418     49     11    121      A
21    556      0      1     42      A
Binding TFs: T19455 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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