DNA Binding Motif

						

			
Accessions: FOXC1_DBD_1 (HumanTF 1.0)

			
Names: FOXC1
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 3
Length: 13
Consensus: AarTAAAyAAAcA
Weblogo: 
PSSM: P0      A      C      G      T
01   2886    190    622    231      A
02   1657    317    248    663      a
03   1306     98   1580    205      r
04    752    324     35   2886      T
05   2886    324     25      7      A
06   2886     53     32     57      A
07   2886      8    110      7      A
08     12   1057      8   1829      y
09   2886     38      9      0      A
10   2886     53     52     57      A
11   2886     82    107    184      A
12    498   2886    204    969      c
13   2886    156    220    142      A
Binding TFs: FOXC1_DBD (Fork head domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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