DNA Binding Motif

						

			
Accessions: YY1_4 (HT-SELEX2 May2017)

			
Names: YY1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 23
Consensus: cgCCATyTTkgrcwwwwyGTGCk
Weblogo: 
PSSM: P0      A      C      G      T
01    105    295    118     87      c
02    166     23    508    141      g
03    109    563     22     12      C
04      0    606      0      0      C
05    607      5      1      1      A
06      0      1      0    606      T
07     62    272     69    203      y
08      6      0     55    587      T
09      0      0      1    607      T
10     33      2    380    515      k
11    172     29    564     68      g
12    244     29    262     71      r
13     16    526    137    155      c
14    242     82    126    155      w
15    265     71     78    192      w
16    219     65     47    275      w
17    167     82    108    250      w
18    140    342     63    211      y
19     83      6    597     19      G
20      7     10      7    603      T
21      7      9    604      1      G
22     23    566     57     70      C
23     17     88    201    300      k
Binding TFs: YY1 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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