DNA Binding Motif

						

			
Accessions: SPI1_HUMAN.H10MO.A|M01529 (HOCOMOCO 10)

			
Names: SPI1
Organisms: Homo sapiens
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: Ets-related factors{3.5.2}; Spi-like factors{3.5.2.5}
Length: 17
Consensus: rrAAAGrGGAASTGara
Weblogo: 
PSSM: P0      A      C      G      T
01    183     78    117     75      r
02    233     41    150     29      r
03    347     18     46     42      A
04    367      7     43     36      A
05    329      4     27     93      A
06     55     17    373      8      G
07    289     30    132      2      r
08     43      1    409      0      G
09      0      0    453      0      G
10    453      0      0      0      A
11    449      0      0      4      A
12      9    134    310      0      S
13      9     10      8    426      T
14      1     15    437      0      G
15    302     34    105     12      a
16    221     34    153     45      r
17    295     50     58     50      a
Binding TFs: SPI1_HUMAN (Ets-domain)
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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