DNA Binding Motif

						

			
Accessions: Barhl1_DBD_1 (HumanTF 1.0)

			
Names: Barhl1
Organisms: Mus musculus
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 2
Length: 10
Consensus: vyTAAayGgy
Weblogo: 
PSSM: P0      A      C      G      T
01   1478   1657   1831    927      v
02   1304   2133    832   1624      y
03    599     53      0   5893      T
04   5893      0      9    901      A
05   5893      0     45      6      A
06   5893    238    933   1816      a
07    444   5893    264   3287      y
08   1176    297   5893    916      G
09   1367   1393   1995   1137      g
10    939   1550    613   2790      y
Binding TFs: Barhl1_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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