DNA Binding Motif
| Accessions: | UN0342.1 (JASPAR 2024), MA2005.1 (JASPAR 2024) |
| Names: | ANAC016, NAC016 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 11 |
| Consensus: | hrCAAGCAAtw |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 853 869 617 926 h 02 996 733 819 717 r 03 17 3090 33 125 C 04 3073 61 63 68 A 05 2869 279 33 84 A 06 24 21 3176 44 G 07 91 2392 72 710 C 08 2866 140 72 187 A 09 2960 68 48 189 A 10 777 800 707 981 t 11 932 779 611 943 w |
| Type: | Heterodimer |
| Binding TFs: | D7KJF4 (No apical meristem (NAM) protein) A4FVP6 (No apical meristem (NAM) protein) A4FVP6 |
| Binding Sites: | MA2005.1.1 / UN0342.1.1 MA2005.1.10 / UN0342.1.10 MA2005.1.11 / UN0342.1.11 UN0342.1.12 MA2005.1.12 / UN0342.1.13 MA2005.1.13 / UN0342.1.14 MA2005.1.15 / UN0342.1.15 MA2005.1.17 / UN0342.1.16 MA2005.1.18 / UN0342.1.17 MA2005.1.20 / UN0342.1.18 UN0342.1.19 MA2005.1.2 / UN0342.1.2 UN0342.1.20 MA2005.1.3 / UN0342.1.3 MA2005.1.4 / UN0342.1.4 MA2005.1.6 / UN0342.1.5 UN0342.1.6 MA2005.1.7 / UN0342.1.7 MA2005.1.8 / UN0342.1.8 MA2005.1.9 / UN0342.1.9 MA2005.1.14 MA2005.1.16 MA2005.1.19 MA2005.1.5 |
| Publications: | Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.