DNA Binding Motif

						

			
Accessions: MA0498.1 (JASPAR 2024)

			
Names: Meis1
Organisms: Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 15
Consensus: asCTGTCAstcwscy
Weblogo: 
PSSM: P0      A      C      G      T
01   1341    122    499    645      a
02    171    759   1414    263      s
03    121   2411      3     72      C
04      0      0      0   2607      T
05      0      0   2607      0      G
06     85     50      0   2472      T
07      0   2607      0      0      C
08   2458      0      0    149      A
09    261   1115   1075    156      s
10    334    537    263   1473      t
11    175   1472    494    466      c
12   1059    547    145    856      w
13    515    802    696    594      s
14    472   1007    536    592      c
15    529    736    480    862      y
Type: Heterodimer
Binding TFs: Q60954 (Homeobox domain, Homeobox KN domain)
Q60954
Binding Sites: MA0498.1.1
MA0498.1.10
MA0498.1.11
MA0498.1.12
MA0498.1.13
MA0498.1.14
MA0498.1.15
MA0498.1.16
MA0498.1.17
MA0498.1.18
MA0498.1.19
MA0498.1.2
MA0498.1.20
MA0498.1.3
MA0498.1.4
MA0498.1.5
MA0498.1.6
MA0498.1.7
MA0498.1.8
MA0498.1.9
			
Publications: Chang C. P., Jacobs Y., Nakamura T., Jenkins N. A., Copeland N. G., Cleary M. L. Meis proteins are major in vivo DNA binding partners for wild-type but not chimeric Pbx proteins.. Mol. Cell. Biol. 17:5679-5687 (1997). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.