DNA Binding Motif

						

			
Accessions: MA1847.1 (JASPAR 2024)

			
Names: Bsx
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: SELEX
Length: 20
Consensus: wakgmswTAATTGsybwwww
Weblogo: 
PSSM: P0      A      C      G      T
01    315    201    229    255      w
02    328    195    232    245      a
03    241    237    251    271      k
04    234    234    286    246      g
05    251    306    233    210      m
06    222    259    367    151      s
07    255    227    244    274      w
08     20     25      8    947      T
09    925     17     25     33      A
10    968     11     12     10      A
11     36     39     53    872      T
12     33    131    116    720      T
13    190     25    750     36      G
14    218    290    286    205      s
15    171    307    211    310      y
16    221    253    262    264      b
17    276    246    223    255      w
18    287    227    224    262      w
19    259    235    203    303      w
20    259    230    219    293      w
			
Publications: José-Edwards DS, Oda-Ishii I, Kugler JE, Passamaneck YJ, Katikala L, Nibu Y, Di Gregorio A. Brachyury, Foxa2 and the cis-Regulatory Origins of the Notochord. PLoS Genet : (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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