DNA Binding Motif

						

			
Accessions: MA1457.1 (JASPAR 2024)

			
Names: grh
Organisms: Drosophila melanogaster
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 13
Consensus: raAACCrGTTtty
Weblogo: 
PSSM: P0      A      C      G      T
01   1170    730    883    549      r
02   1915    477    535    405      a
03   3090     27     89    126      A
04   3211     20     57     44      A
05     29   3265     18     20      C
06    187   2825    199    121      C
07   1914    194    838    386      r
08     20     57   3221     34      G
09     49     34     23   3226      T
10     58     96     23   3155      T
11    358    569    407   1998      t
12    546    786    818   1182      t
13    754    933    783    862      y
Type: Heterodimer
Binding TFs: P13002 (CP2 transcription factor)
P13002
Binding Sites: MA1457.1.1 / MA1457.1.3
MA1457.1.10
MA1457.1.11
MA1457.1.12
MA1457.1.13
MA1457.1.14
MA1457.1.15
MA1457.1.16
MA1457.1.17
MA1457.1.18
MA1457.1.19
MA1457.1.2 / MA1457.1.4
MA1457.1.20
MA1457.1.5
MA1457.1.6
MA1457.1.7
MA1457.1.8
MA1457.1.9
			
Publications: Yao L, Wang S, Westholm JO, Dai Q, Matsuda R, Hosono C, Bray S, Lai EC, Samakovlis C. Genome-wide identification of Grainy head targets in Drosophila reveals regulatory interactions with the POU domain transcription factor Vvl. Development 144:3145-3155 (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.