DNA Binding Motif
| Accessions: | PAX5_DBD (HumanTF 1.0) |
| Names: | PAX5 |
| Organisms: | Homo sapiens |
| Libraries: | HumanTF 1.0 1 1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed] |
| Notes: | Site type: monomeric; SELEX cycle: 3 |
| Length: | 18 |
| Consensus: | sGTYACGSwTsrsTrmdy |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 400 1223 962 544 s 02 61 39 2973 433 G 03 469 320 76 2815 T 04 103 3005 21 1045 Y 05 3249 256 171 120 A 06 45 3206 16 741 C 07 242 21 2971 5 G 08 13 3036 1258 18 S 09 1580 300 249 1273 w 10 82 848 5 2637 T 11 22 1432 1803 109 s 12 2228 21 1025 7 r 13 678 849 901 683 s 14 122 646 110 2553 T 15 1106 39 2849 207 r 16 1050 1521 760 27 m 17 786 511 813 895 d 18 96 1589 210 1337 y |
| Binding TFs: | PAX5_DBD ('Paired box' domain) |
| Publications: | Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed] |
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