DNA Binding Motif

						

			
Accessions: 4awl_A (3D-footprint 20231221)

			
Names: NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT ALPHA
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: The NF-Y transcription factor is structurally and functionally a sequence specific histone
Length: 6
Consensus: CAATCA
Weblogo: 
PSSM: P0      A      C      G      T
01      0     96      0      0      C
02     96      0      0      0      A
03     96      0      0      0      A
04     11      9      9     67      T
05      9     69      9      9      C
06     67      9      9     11      A
Binding TFs: 4awl_A (CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B)
Binding Sites: 4awl_I
4awl_J
			
Publications: Nardini M, Gnesutta N, Donati G, Gatta R, Forni C, Fossati A, Vonrhein C, Moras D, Romier C, Bolognesi M, Mantovani R. Sequence-specific transcription factor NF-Y displays histone-like DNA binding and H2B-like ubiquitination. Cell 152:132-43 (2013). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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