DNA Binding Motif

						

			
Accessions: MA2369.1 (JASPAR 2024)

			
Names: ZHD14
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: DAP-seq
Length: 11
Consensus: AWwATdCGwww
Weblogo: 
PSSM: P0      A      C      G      T
01    920 18.333 31.667     30      A
02    278      0  6.667    715      W
03    518     40     25    417      w
04   1000      0      0      0      A
05      0    152      0    848      T
06    278  3.333    395    323      d
07 13.333    888      0 98.333      C
08 78.333 33.333    865 23.333      G
09    433 78.333    137    352      w
10    333 33.333 31.667    602      w
11    293 36.667 56.667    613      w
Binding TFs: Q9LQW3
			
Publications: Hong SY, Kim OK, Kim SG, Yang MS, Park CM. Nuclear import and DNA binding of the ZHD5 transcription factor is modulated by a competitive peptide inhibitor in Arabidopsis. J Biol Chem 286:1659-68 (2011). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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