DNA Binding Motif

						

			
Accessions: MA0745.3 (JASPAR 2024)

			
Names: SNAI2
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 8
Consensus: gCACCTGT
Weblogo: 
PSSM: P0      A      C      G      T
01  10322   6393  26742   2359      g
02    408  44463    323    622      C
03  44963    202    424    227      A
04    112  45144    326    234      C
05    246  44739    487    344      C
06     78    313    196  45229      T
07    179    254  45257    126      G
08    814   6467   1263  37272      T
Type: Heterodimer
Binding TFs: O43623 (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
O43623
Binding Sites: MA0745.3.19 / MA0745.3.9
MA0745.3.13 / MA0745.3.7 / MA0745.3.8
MA0745.3.5
MA0745.3.1 / MA0745.3.10 / MA0745.3.11
MA0745.3.12 / MA0745.3.20 / MA0745.3.3 / MA0745.3.4
MA0745.3.14 / MA0745.3.16 / MA0745.3.17 / MA0745.3.18
MA0745.3.15 / MA0745.3.6
MA0745.3.2
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.