DNA Binding Motif

						

			
Accessions: M0197 (AthalianaCistrome v4_May2016)

			
Names: bZIP16.ampDAP, T09955;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: dwwkstsACGTGGCA
Weblogo: 
PSSM: P0      A      C      G      T
01    217     58    159    163      d
02    228     65    110    194      w
03    181     50     76    290      w
04     52     12    363    170      k
05    132    230    175     60      s
06     96    141      0    360      t
07      0    208    340     49      s
08    597      0      0      0      A
09      0    592      0      5      C
10      5      0    592      0      G
11      0      0      0    597      T
12      0      0    597      0      G
13      0      0    508     89      G
14     58    539      0      0      C
15    439     41     90     27      A
Binding TFs: T09955 (bZIP transcription factor, Basic region leucine zipper, G-box binding protein MFMR)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.